Bathymetry of shallow water using multispectral images taken from UAV
This article describes the research activity conducted by Dr. Leonardo Bassani in the Geography section of DISCI Department of the University of Bologna, in collaboration with SAL Engineering.
The traditional techniques in bathymetric surveys like multibeam, singlebeam or LIDAR are really expensive and require complex data processing. In the ‘80 and the ‘90, when the first multispectral satellite mission started to collect multispectral images of earth and sea surface, some researchers tried to calculate the bathymetric profile in shallow water using satellite multispectral images. The development of different algorithms and image processing methods led to the birth and success of the discipline called Satellite-Derived-Bathymetry (SDB). The results were good but the big issue was the low resolution of satellite images that prevent the production of high quality cartography.
MAIA WV is the multispectral camera developed by SAL-Engeneering, Eoptis and Fondazione Bruno Kessler in order to achieve big results in proximal sensing. The camera permits to acquire high resolution multispectral images in different bands of VIS and NIR electromagnetic spectrum regions.
MAIA WV multispectral camera is equipped with the same wavelength intervals of the DigitalGlobe WorldView-2™ satellite. The purpose of this research is to apply the algorithm used for the satellite images to extrapolate the 3D model of shallow water seabed using MAIA WV multispectral camera, and produce seabed cartography with high resolution, keeping the costs of the operations below the threshold of a traditional bathymetric survey. The research was conducted on May 27, 2019 near La Ciotat, a french commune in Bouches-du-Rhône department, 40km east of Marseille. The camera was mounted on a DJI-S900 UAV through personalized support and three flights were performed in different time of the day to evaluate the various condition of sun light. Approximately 300 images per flight were taken. The radiometric correction of the MAIA WV images was performed with the ILS (incident light sensor) mounted onboard UAV. The images were taken from 100 m above the sea surface with a ground sampling distance on the sea surface of ~5cm. MAIA WV camera takes images of 1.2 Mpixel in each band.
A difficult part of this research was the operation of geo-referencing and merging the images to create the mosaic of water surface.
It was also necessary to correct the sun glint: this issue was caused by the sunlight reflection on the water surface that produce a saturation of reflectance value in some pixels of the image. Problems related to geo-referencig and mosaicking force us to apply some approximation in the model. The images was georeferenced using the GNSS data acquired by the antenna mounted onboard UAV: these coordinates was not really accurate and this was the cause of some important error in planimetric positioning.
To avoid this error, where the seabed morphology was clearly visible, some images were manually georeferenced using as a reference some target located on the shoreline: this process can reduce the positioning error especially in the area near the shoreline.
The final model was created at a resolution of 50 cm to fit the model to the reality and to smooth the error.
The chosen algorithm to derive the bathymetry was developed by Stumpf (2003). This algorithm use a two band ratio equation where the different absorption of the bands in water is exploited to derive the water depth. The Stumpf algorithm requires some control point to scale the ratio to depth. Due the different seabed morphology it has been decided to split the model in two part, an area of open sea in the middle of the bay and an area near the reef where the seabed features are clearly visible.
Images have been georeferenced using data derived from GNSS positioning system onboard UAV. Given that images were taken 100 m above the water surface, it derives that images are georeferenced on the surface of the sea, which is assumed to be flat, horizontal and at the orthometric altitude equal to zero, a choice that we know to be remarkably approximate.
Multiband mapping of the orthomosaic obtained. RGB: 3-2-1.
This is not correct also because the images return the sea bottom actually and not the water surface. To correct this issue an iterative georeferencing processing in GIS has been implemented. Then, it has been applied the Stumpf algorithm on the mosaic to obtain the depth model, and then, using this model, the images are re-projected on the sea bottom considering the distortion caused by the water refraction. Finally, with this new corrected images it has been re-created the mosaic and re-applied the algorithm to obtain the final model.
As mentioned above, the model has been splitted in two areas, the ratio algorithm has been applied in both the areas using different combination of bands (Blue/Green, Green/Blue, Blue/Orange). Green/Blue is found to be more suitable for estimating bathymetry in the open sea, while Blue/Orange was more suitable for estimating bathymetry in areas with less depth and with a more diversified morphology in the seabed.
Depth model plus isobaths 1 m.
The reference model which to validate our result with, is available online from SHOM (Service Hydrographique et Océanographique de la Marine). The reference model was created into the LITTO3D® project by a airborne bathymetry lidar.
We can see an offset in absolute value (A.V.) between our model and the reference model of ~0.34 m in ratio Blue/Green and Green/Blue with a standard deviation (SD) of ±0.23 m. If we consider the resolution of our model (50 cm) we can assert that this is a good result (we must not forget the error caused by low accuracy GNSS positioning) for estimating bathymetry in shallow water.
In the other area, where we can see the irregular seabed morphology and some seagrass meadows, the results are a little worse. Here the best result is from Blue/Orange ratio and we can see an A.V. offset of 0.56 m with a SD of ±0.46 m. We must consider that the seabed heterogeneity emphasize the GNSS positioning error.
This result can be observed even in the seabed profiles extracted from the depth model. There are issues in the areas of shallow water and where we have some seagrass meadows. The algorithm is more sensible to the bottom albedo where the water is shallow and also where the seagrass causes some absorption variation.
In conclusion, we can asset that is possible to use MAIA WV multispectral camera for bathymetric survey. This methodology must be implemented in future and a lot of errors can be fixed but we are sure that this is an important step to develop this methodology and technology.
“Quantitative Remote Sensing at Ultra-High Resolution” on Remote Sensing journal
“Overall, we expect that UAV spectral sensing systems will become common in the toolbox of researchers in quantitative remote sensing, forestry, agriculture, field phenotyping, ecology, and other fields that rely on environmental monitoring. […] In combination with commercially built fixed-wing or rotary-wing UAVs, these cameras are becoming a powerful tool for researchers, as their rapid adaption shows, but also for service providers, breeding companies, and even farmers”.
We are happy that our work of design, study, experimentation, data acquisition and processing is leading to great satisfaction in the world of scientific research. In the paper linked below and published on Remote Sensing journal, you can read a review of the most important technological innovations regarding the high resolution multispectral survey. And MAIA is certainly counted among them.
“The important tasks now are to standardize procedures, develop algorithms, and explore the
potential to make use of the large amounts of multi-dimensional, high spatial, temporal, and spectral resolution UAV data. In this review, we showed that many approaches exist, and identified best practice procedures to derive calibrated spectral data from UAV sensing systems”.
You can read and download the paper by clicking on the link below.
Multispectral survey of turf and grass cultivation
The specialized branch of agronomy that deals with the production and maintenance of turfgrass, characterized by a very high technological content, and where important contributions are at stake to ensure the excellence of the cultivations, has certainly not missed the potential offered from the multispectral survey, for the in-depth knowledge of the biological, chemical and physical phenomena that characterize the plots.
Natural grass in a football pitch.
High quality grassy meadows, such as golf courses, soccer fields or gardens, require a significant supply of water and nutrients, as well as intensive maintenance. It is certainly an area of employment characterized by high maintenance costs, where particularly efficient management is required. In particular, it is increasingly important to plan the agronomic management of the turf industrial cultivation in such a way as to make it as site-specific as possible. Within the plots, it is important to map the phenological variability and the diversification of the interventions, with a view to the sustainability of the cultivation from an economic and environmental point of view.
The applications of the multispectral survey are experiencing great technological development and great interest mainly because they are addressed to the in-depth knowledge of the environmental reference matrix (vegetation, soil, water) with a view to productive efficiency (variability mapping), environmental sustainability (site agronomic intervention), to rationalizing the use of natural resources (monitoring of water supply and location of deficiencies), environmental protection of ecosystems (protection of biodiversity), but above all with a view to the safety of environmental services (monitoring quarries and landfills), settlements (hydrogeological risk) and food products (eco-sustainable agricultural production).
Agriculure and Forestry
· Water supply management
· Rationalization of pesticide
· Variable fertilizer distribution
· Yield estimation and comparisons
· Prevention of critical pathologies
· Classification of species
· Protection of ecosystems
Environmental monitoring
· Spill control in water bodies
· Bathymetry of shallow waters
· Control of drains in soils or water bodies
· Classification of polluting materials
· Control of quarries and landfills
· Mapping of leachate flows
· Identification of illegal landfills
Industrial sites
· Classification of materials in deposits
· Inspection of industrial waste
· Inspection of industrial plants
· Inspection of spills and roofs
Geology
· Soils classification
· Physical-chemical characterizations of soils
· Mapping of soil compaction
· Mapping of paleo-river beds
The vegetative trend of the turf, linked to seasonal climatic conditions, can be monitored through multispectral survey and vegetation indexes, in correlation with the data acquired from other sensorial platforms on the ground, to estimate the nitrogen fertilization requirements, to evaluate the effects of mowing, and to plan irrigation flows and methods (sub-shallow drip irrigation or spray irrigation).
The conditions of vegetative stress of turf, fungal attacks, water shortages must be diagnosed promptly with data acquisition systems that provide tools and information more detailed and useful to the green keeper. Within a competitive market, and attentive to environmental sustainability, it is no longer sufficient to regulate fertilizers and interventions on the basis of visual analysis, nor those simple diagnostic tools of instantaneous detection, which photograph the state of health, reporting the NDVI index values, often in an unreliable and inaccurate manner.
Thanks to new sensor-based proximal sensing technologies installed on board remotely piloted aircraft, it is possible to map the variability inside the turf farms, in golf courses, in soccer fields and in gardens, obtaining useful and above all rigorous cartographic products from the geographical, geometric and radiometric point of view, with great efficiency in terms of time, cost of the survey, precision and accuracy of the products, with an important added value about the agronomic knowledge of the crop.
Brown patch (Rhizoctonia solani), a disease that presents with circular brown spots on the turf.
The know-how of the agronomist, or better in this case of the green keeper, who knows the critical aspects of the plots and traces the interventions carried out, is fundamental in the multispectral survey planning phase, because according to his indications the survey will be set such a way to obtain cartographic products with a specific geometric resolution (choosing the ground sample distance of the digital maps) and spectral (choosing to use a camera with certain wavelength ranges), but above all its analysis of the obtained data and of the indices calculated will be strategic to decide the agronomic interventions to be implemented on the grass.
Rhizoctonia solani is a typical disease of hot and humid periods and its development is favored by an excessive nitrogen fertilization as well as by too frequent irrigations. Agrostide, lolium and festuca arundinacea are the most susceptible species; poa and fine fescues (rubra and ovina) are very resistant.
Indexes calculated on the multispectral data, as we read in the scientific literature, are variously correlated to the visual quality measurements of the discipline that studies grassy surfaces, such as density, texture, uniformity, color. These specific indices are also used to assess the effects of prolonged trampling, periods of water shortage, and different mowing methods. Other calculations between the reflectances of certain bands can instead estimate the need for certain nutrients in a specific vegetative phase. For example, if a comparison is made between two multispectral surveys shortly before mowing and immediately after mowing, it is highlighted by many that mowing affects the data collected for all visible bands with a constant increase of around 4%, but, moving to the near infrared, this increment is not recorded (Sullivan, Dana & Zhang, Jing & R. Kowalewski, Alexander & B. Peake, Jason & F. Anderson, William & Waltz, Clint & M. Schwartz, Brian. 2017). Consequently, those vegetation indexes that normalize the reflectance of the infrared on the reflectance of the red, as the most common NDVI (Normalized Difference Vegetation Index), will also drop immediately after mowing.
For these purposes, and as we will see later, it is essential to use a multispectral survey instrument that allows to investigate the turf at wavelengths distributed along the whole electromagnetic spectrum that from violet reaches the near infrared, to have the possibility to calculate indices that not only consider the red or near infrared band, but that can provide useful indications with a complete spectral screening of the culture. Very important is also the control during the extraction and processing of the geometric and radiometric data of the images that the multispectral camera acquires.
The ideal, in this type of application, is a multispectral camera which completely covers the electromagnetic spectrum from Visible to Near Infrared, and which has narrow-band configurations in certain wavelength values, such as in the Red Edge or in Near Infrared, to be able to investigate specific phenomena of photosynthetic activity, the presence of particular elements and the occurrence of physical or chemical phenomena related to vegetative development.
MAIA multispectralcamera + ILS – Incident Light Sensor
The MAIA Multispectral Camera can be used on board RPAS (Remotely Piloted Aircraft Systems, better known as drones or UAVs, Unmanned Aerial Vehicles), airplanes and land rovers in multispectral survey operations. MAIA is composed of an array of 9 1.2 Mpixel sensors (9 monochrome sensors with real band-pass filters in the MAIA S2 filter-set, and 8 monochromatic plus 1 RGB in the MAIA WV filter-set) to acquire images in the VIS-NIR spectrum. MAIA WV has the same wavelength ranges as DigitalGlobe’s WorldView-2™ satellite, from 433 nm to 950 nm. MAIA S2 has the same wavelength ranges as ESA’s Sentinel-2™ satellite, from 433 to 899.5 nm. It is a project of the highest technological value entirely Made in Italy.
SAL Engineering UAV SP001 equipped with MAIA.
The CMOS sensors installed in MAIA have excellent characteristics in terms of sensitivity; the resolution is 1280×960 pixels and the size of the sensor pixel is 3.75 μm x 3.75 μm; each sensor is Global Shutter and acquires simultaneously: it follows that it is not necessary to stabilize the shot with a gimbal, which instead remains indispensable with rolling shutter sensors to avoid distortions and blurred pixels in the image. The high quality and radiometric correctness of the data obtained with MAIA are therefore guaranteed even in high speed flights. Each optics, of every MAIA built, is calibrated in the laboratory by 3DOM – Fondazione Bruno Kessler, and for each device the Calibration Certificate is available, with the following parameters:
calibrated focal length;
position of the main point;
lens distortion parameters.
The user can interact with the camera to configure acquisition operating parameters and to manage images either via a GigaEthernet port or via integrated WiFi. Many parameters can also be configured via the keyboard using the On Screen Display in the composite video output. Thanks to a web panel, MAIA allows a precise adjustment of all the parameters concerning the acquisition, from the exposure time to the shutter frequency, while automatic configurations are available for standard operations.
DJI S900 UAV equipped with MAIA
MAIA can communicate and be interconnected with different devices:
GNSS: GPS L1 or L1 / L2; GLONASS, Galileo, Beidou, to obtain a log file with the positions of the synchronized shots (available in PPP, PPK, RTK);
VIDEO TX for real-time transmission of images from each sensor, even remotely;
RDX for remote control of the Camera (frame rate, selection of the video source, activation of the Wi-fi);
GIMBAL for orientation, displacement and balancing control (an IMU integrated with 3 accelerometers and 3 gyroscopes provides orientation parameters).
The images acquired by MAIA are saved on an internal hard disk (120Gb SSD) which ensures high writing speed and the possibility of saving up to 10,000 images in 12-bit format (MAIA acquires 8-bit, 10-bit and 12-bit images).
MAIA WV, as mentioned above, consists of a RGB sensor to obtain images with real colors, and 8 monochromatic sensors with sensitivity in the VIS-NIR spectrum from 390 nm to 950 nm. Monochromatic sensors are coupled with band-pass filters which determine the wavelength intervals that can be investigated, as shown in the following graph.
MAIA WV amplitude and distribution of wavelenght intervals
MAIA S2, on the other hand, is the multispectral camera with 9 sensors designed and developed to have 9 bands with the same wavelength ranges as the European Space Agency’s Sentinel-2™ satellite. Each sensor has a resolution of 1280×960 pixels (1.2 Megapixels) and the size of each sensor pixel is 3.75 μm x 3.75 μm. Monochromatic sensors are coupled with band-pass filters which determine the wavelength intervals that can be investigated, as shown in the following graph.
MAIA S2 amplitude and distribution of wavelenght intervals.
The products of the multispectral survey carried out with the MAIA multispectral camera are therefore multilayer or multichannel images corrected for radial and geometric distortion, and with the pixel-based co-registration of the radiometric information for all bands.
DJI S900 equipped with MAIA and ILS – Incident Light Sensor
This is done by MultiCam Stitcher Pro, the software for extracting and processing images acquired with MAIA developed by 3DOM – Bruno Kessler Foundation, with which it is possible to operate the radiometric correction of multispectral images, to obtain the correct reflectance data, repeatable and comparable in different environmental conditions.
For this purpose, SAL Engineering and Eoptis have developed and patented ILS – Incident Light Sensor, an incident light sensor that records the incident and diffused environmental radiation at the time of each single shot, to conduct the radiometric correction of the multispectral data based on the conditions of real and contingent electromagnetic energy. In addition, ILS has a 6-axis inertial platform for orientation data, an environmental sensor for obtaining atmospheric pressure, temperature and humidity data, and has a GNSS receiver for geo-referencing the acquired images, also available in an RTK version for centimetric positioning accuracy. All the parameters measured by ILS are automatically recorded in a log file related to the set of images acquired, and are immediately ready for the pre-processing operations with MultiCam Stitcher Pro.
On the basis of the instructions and the operational needs of the green keeper, the multispectral survey carried out with MAIA can provide images acquired at such a level as to ensure the presence of the entire plot under investigation in the frame: on this image can be operated a flat projective transformation, thanks to the measurement of the coordinates of some markers present in the scene. Thanks to the image pre-processing software, calculations can be performed directly on the images, to obtain indexes that, with agronomic technical supervision, become a fundamental tool for the preventive diagnostics of turf pathologies and for their monitoring. For larger plots, on the other hand, it is advisable to obtain a georeferenced multispectral orthophoto from the alignment of multiple images acquired with photogrammetric strips and from the 3D model created by photogrammetric processing software.
With reference to satellite images and images obtained by proximal sensing, a great deal of academic research is underway on the formulation of indexes and calculations between bands for the agronomic study of different crops (and among these, also of grassy coverings). Equally important is the transformation of vegetation indices into prescription maps, to direct the agronomic intervention in the field.
RGB combination in real colors (RGB = 532 – MAIA WV) after correcting geometric and radial distortion and after radiometric correction, of a plot in an intensive cultivation of turf. The image was acquired at an altitude of 25 m AGL (GSD: 12 mm / pixel) on a day with a clear sky in July 2017.
SAL Engineering, together with various operators in the sector, is involved in the research activity for the study and application of indexes and calculations on the single image or on the multispectral orthophoto obtained from the survey carried out with MAIA. Since July 2017, and then in the following years, several acquisitions were carried out using the MAIA WV filter-set in a turf farm, in a golf course and in a soccer field in Tuscany, for evaluate the contribution of the different data acquisition technologies within a monitoring and management plan for industrial cultivation and turf maintenance.
In these portions, together with the multispectral survey, measurements were carried out with technologies and methodologies typical of agronomic studies on turf, and above all agronomic interventions were traced. Scientific research is still in progress: we will limit ourselves here to the presentation of some vegetation indexes that are applicable to the diagnosis of turf according to scientific contributions in literature.
Below an image acquired in a turf farm, on which several multispectral indexes have been applied to enhance phenomena on the turf. Here is a sample list of indexes calculated:
NDVI (Normalized Difference Vegetation Index – (NIR-Red)/(NIR+Red)) – MAIA was developed with the intention of providing a functional tool for in-depth knowledge of crops thanks to the precise definition of the red interval and the differentiation in different bands of the Red Edge and NIR (Near Infrared) in order to perform differentiated calculations in the study of vegetation health and in order to normalize the most studied, widespread and applied vegetation indexes calculation on the reflectance of other wavelength ranges, such as blue, green and violet. In the next images, where not explained, the lowest values are those that tend more to black, while the higher values tend to white.
Index NDVI (MAIA WV) after correction of the geometric and radial distortion and after radiometric correction, of a plot in an intensive cultivation of turf. The image was acquired at an altitude of 25 m AGL (GSD: 12 mm / pixel) on a day with a clear sky in July 2017.
NDRE (Rededge Normalized Difference Red-Edge – (NIR-RedEdge)/(NIR+RedEdge)) – This index is very sensitive to the chlorophyll content in the leaf apparatus; it is also very useful for extracting the vegetative part from the underlying soil and for limiting the effects of the soil on the datum of reflexivity relative to the foliar apparatus of the grass cover. High NDRE values represent higher levels of chlorophyll content in grass blades: the soil has the lowest values, while unhealthy leaves have intermediate values. It is also indicated to map the variability of nitrogen-based fertilizer requirements for the foliar apparatus, but it is not a good indicator for the nitrogen requirement in the root system. The NDRE index is therefore an indicator of the state of health of the turf, and of how lush, green, uniform and compact in the leaf coverage, better than the NDVI in the summer and autumn season. Furthermore, it is a higher performing index of NDVI during a monitoring set on frequent and intra-seasonal surveys because in many cases the NDVI loses sensitivity (ie information of variability within the plot) with increasing storage of chlorophyll in the leaf apparatus and with increasing leaf coverage area.
Index NDRE (MAIA WV) after correction of the geometric and radial distortion and after radiometric correction, of a plot in an intensive cultivation of turf. The image was acquired at an altitude of 25 m AGL (GSD: 12 mm / pixel) on a day with a clear sky in July 2017.
GNDVI (Green Normalized Difference Vegetation Index – (NIR-Green)/(NIR+Green)) – This index replaces green to red in the NDVI formula to highlight and differentiate the presence of chlorophyll inside the leaves of the turf: it is essential in a monitoring plan that provides for several frequent acquisitions at a set time interval, to identify the moments of activation and inter-season quiescence. Also suitable for estimating nitrogen-based nutrient requirements and for locating water shortages.
Index GNDVI (MAIA WV) after correction of the geometric and radial distortion and after radiometric correction, of a plot in an intensive cultivation of turf. The image was acquired at an altitude of 25 m AGL (GSD: 12 mm / pixel) on a day with a clear sky in July 2017.
EVI (Enhanced Vegetation Index – (2.5*((NIR2-Red)/((NIR2+6*Red-7.5*Coastal)+1))) – In areas characterized by high vegetative density (such as turf), the reflectance information obtainable in the high frequencies of the Blue or the Purple are strategic in the measurement of these vegetational indices, to penetrate the surface of the leaves and evaluate the presence of water and for map the variability in terms of nutrient inputs, before and after the scheduled treatments. Tendentially, the EVI index shows values from 0.2 to 0.8 for photosynthetically active vegetation, thus classifying it from the worst to the best state of health.
Index EVI (MAIA WV) after correction of the geometric and radial distortion and after radiometric correction, of a plot in an intensive cultivation of turf. The image was acquired at an altitude of 25 m AGL (GSD: 12 mm / pixel) on a day with a clear sky in July 2017.
NRGRI (Normalized Red Green Ratio Index – (Red-Green)/(Red+Green)) – The relationship between the reflectance of the turf in the red band and the reflectance in the green band, in certain environmental and phyto-vegetative conditions, is an important test to assess the vegetative health of the grass cover, especially if related to other site measurements- specifications. In this index, the lowest values (which are those that tend more to black, while the higher values tend to white) highlight the areas with greater vigor.
Index NRGRI (MAIA WV) after correction of the geometric and radial distortion and after radiometric correction, of a plot in an intensive cultivation of turf. The image was acquired at an altitude of 25 m AGL (GSD: 12 mm / pixel) on a day with a clear sky in July 2017.
NWSI (Normalized Water Stress Index – (Coastal-Red)/(Coastal+Red)) – The reflectance information at the high frequencies of the Violet range is normalized on the Red, which in the healthy vegetation has a high absorption. High values of this index, ie those more tending to white, are found in areas with high water content within the leaf apparatus and in the soil, while low values denote a lack of water and aging or dry vegetation.
NWSI index (MAIA WV) after correction of the geometric and radial distortion and after radiometric correction, of a plot in an intensive cultivation of turf. The image was acquired at an altitude of 25 m AGL (GSD: 12 mm / pixel) on a day with a clear sky in July 2017.
Several other multispectral vegetational indexes were calculated, like PRI, SAVI, CCCI, BWDRVI, ecc.
Scientific studies show that methods of diagnostic evaluation of the turf that use other tools are confirmed by the data obtained from the survey carried out with MAIA multispectral camera: for example, the CWSI index (Crop Water Stress Index), which is an evaluation tool for monitoring the water stress and to plan the irrigation rate, which is obtained from the plant temperature minus the air temperature, divided by the atmospheric vapor pressure deficit (AVPD) (Alderfasi, Nielsen. 2001), is positively correlated with the NWSI index above. Or the CGI (Crop Growth Index), which is a measure of the increase in size and mass of the crop over a period of time, the calculation of which depends on the values of NAR (Net Assimilation Rate) and LAI (Leaf Area Index), it is very useful if it is related to other indices such as GNDVI if we want to estimate the growth of vegetation cover over a given period of time.
Research and development in the field of multispectral data acquisition systems, both in the platform and in the field of sensors, which, with regard to image analysis, are working to give the agronomic discipline more and more cognitive tools of biological, physical phenomena and chemicals that occur within individual plants. Certain calculations are applied to the reflectance data of the individual bands, indices are calculated on the image or on the multispectral orthophoto, or the digital number values relating to specific bands are distributed in the three RGB channels to diversify the turf areas.
These data are the geo-referenced cartographic basis for all site-specific agronomic and meteorological measurements that define the culture monitoring framework. The analysis subsequent to the acquisition and processing can lead to the diagnosis and localization of the symptomatic signs of turf criticality. Some are listed here:
Soil compaction – It consists of a crushing of the soil particles between them, with a consequent decrease of the empty spaces of the microporosity and of the macroporosity, responsible respectively for the movements of water and air in the ground. The phenomenon mainly concerns finer-textured soils (clay or silty), especially if trampled under wet conditions and only in the first 5-7 cm. Increasing the compaction therefore decreases the aeration of the soil that is depleted of oxygen, saturating itself with carbon dioxide and other toxic gases for the roots. Water movements become more difficult, the infiltration and percolation of water along the profile decreases, and therefore any water stagnation can be highlighted and localized by a differentiation in the vegetation cover of the turf.
Water stress – A phenomenon of water scarcity can be detected and localized in the leaf apparatus or in the ground, or on the contrary an excessive intake of water or nutrients, and identify areas where there is water stagnation due to the composition of the soil or its excessive compaction; it is possible to map the texture of the soil and to distinguish the most clayey or loamy soils from the sandy ones, perhaps comparing the multispectral survey with a survey carried out with an electromagnetometer, and consequently deciding where and how to spread the lawn rolls, and how to plan the irrigation and drainage system.
Thermal stress and humidity – The species used for most lawns for ornamental and sports use are Festuca arundinacea, Poa pratensis, lolium perenne and Festuca rubra rubra. These essences are microthermal, ie they live in optimal conditions in warm continental and temperate Mediterranean climates. This means that with temperatures above 26 degrees maximum and above the minimum of 20 they suffer from heat but above all from humidity. The humid heat favors the development of most of the pathogenic parasitic fungi of the turf: at the same temperature, the increase in humidity (the relative humidity is the moisture content in relation to the temperature) determines a “heating” of the turf which in turn triggers a series of retroactive processes that slow down the metabolic processes of the herb, increasing the state of stress. When the water vapor content increases (ie increases atmospheric humidity) the difference with the water vapor contained within the leaf is reduced: consequently the plant transpires less. By decreasing the recirculation of water between the plant that absorbs it from the soil and the external atmosphere, the leaf tends to heat up more, the whole plant increases in temperature, also accumulating a strong thermal stress. In essence, even though it may seem paradoxical, in order to continue photosynthetic processes correctly, the lawn must lose water in the right quantities to cool down and keep cool. In climatic conditions where high humidity is associated with a high level of humidity, maintenance operations must ensure that the lawn is well ventilated and drained, as well as being well watered in the cold hours. In climatic zones of dry heat, it will instead be very important to constantly bathe. The scientific literature of studies on vegetation confirms that evapotranspiration and photosynthetic activity are easily monitored phenomena with multispectral relief.
Grass fungus disease
Fungal attacks – The symptoms of a toxic contamination of the turf, however depending on the season, the humidity, the geographical area, the temperature and the surface content of water, are often represented by more or less regular and variable spots in size and in color. The multispectral survey conducted with MAIA can locate and perimeter the areas presenting fungal attacks: thanks to the high geometric and radiometric resolution of the sensors (1280×960 pixels and sensor pixel size of 3.75 μm x 3.75 μm), the symptoms of a intoxication, which are represented by widespread and generalized yellowing of the lawn, linked to the presence of many irregular spots on the leaf lamina, such as to give a general and indistinct aspect of the turf.
Cyanobacteria and algae – They can cause various problems to grass surfaces: they alter the appearance, block the possibility of light reaching the grass and can make the surface slippery. The Nostoc, for example, are cyanobacteria that create dark green or blackish gelatinous growths, which often appear in conditions of high humidity over the entire surface of the lawn, making it slippery. Lichens are brown or gray growths that grow horizontally in the turf always in autumn / winter, when we can also find white, yellow or orange molds that produce small gray fruiting bodies that then release masses of violet spores – Bruno. Cyanobacteria, lichens and liverworts are found on meadows where drainage is scarce and shadow conditions cause a wet surface. The compacted soil is particularly prone to developing algae, particularly around the drip line of trees or shrubs.
The analysis of the results obtained can be done on GIS softwares, where geo-referenced informations can be managed, and where there are several tools to graphically show and map those areas with different condition on the turf, so as to provide the agronomists a precise diagnostic tool on which to base the crop monitoring plan. It is also possible to integrate the multispectral images and the reflectance data of each single pixel obtained from the multispectral survey in the cultivation management software that the agronomist uses for maintenance.
Thanks to the multispectral survey, information can be obtained for:
Rationalize fertilizing by localizing symptoms of nutritional deficiencies
Choose frequencies and right moments for mowing and monitor the consequences
Choose the best performing species based on acquired environmental and multispectral data
Rationalize pesticide applications by identifying biotic stress in advance
Rationalize the supply of fertilizers through localized and site-specific interventions
Rationalize water supply by identifying areas with real water scarcity
Prevent fungal attacks on the turf by promptly intervening
Avoid excessive compaction by monitoring the consequences in real time
Enrich the land with sustainable long-term fertilization plans
SAL Engineering drone and ground control station ready to fly over a cultivated ornamental turf field.
The analysis of vegetative criticalities on turf for sporting or ornamental use has the purpose of highlighting the factors limiting the correct metabolism of the planted species and therefore the vegetative activity of the vegetation cover. The aim is to optimize growth, promote the development of the root system and make the crop uniform, in a crop management that could be more and more sustainable.
MAIA Multispectral Camera is a project of the highest technological value entirely Made in Italy. It is the right tool to carry out the preventive diagnostic phase at specific times of the year, where certain phyto-vegetative conditions are expected, to have orthorectified and geo-referenced images, and cartographic analysis products obtainable from them.
The early identification of the critical issues has in fact a positive effect on the qualitative yield, on the ability to withstand stresses and on management costs: a seasonal monitoring plan of the turf can no longer ignore such a multispectral proximity survey.
MAIA M2 is the new lightest modular multispectral camera
The potential offered by RPAS (Remotely Piloted Aircraft Systems) in environmental prevention and monitoring is related to the possibility for sensors to fly over areas of interest. In the last decade proximal sensing technology saw a great development both with regard to sensors (lightweight multispectral and iperspectral sensors) and platforms (aircraft, helicopters, RPAS). Research and development in photogrammetric and multispectral surveys is offering new innovative solutions in sensors and technologies to monitor our environmental resources with very high frequency, precision and reliability.
MAIAis the most advanced multispectral camera designed to be employed onboard UAV systems, airplanes and terrestrial rovers as well, jointly developed and made in Italy by SAL Engineering, that designs and manufactures systems for data acquisition in sea, air, land environments, EOPTIS, specialized in designing and manufacturing opto-electronic measurement instruments, and 3DOM Research Unit of Fondazione Bruno Kessler, that is actively involved in accurate measurements and reality-based 3D reconstruction issues. In this team the Italian excellence in the fields of physics, optics, geomatics, 3D modeling and remote sensing have been concentrated: a consolidated know-how was made available for the construction of a multispectral imagery acquisition instrument that could ensure scientific rigor and total control of geometrical and radiometric data for a correct multispectral survey.
Regarding the differentiation of wavelenght intervals along the electromagnetic spectrum, MAIA has been designed according to two main sets: MAIA WV and MAIA S2. Nevertheless, thanks to the profitable collaboration with agronomic consulting companies and environmental protection agencies, or with universities and research institutes, a fully customizable modular solution was subsequently developed.
MAIA M2, in fact, is the new modular multispectral camera that the user can customize with a large portfolio of VIS-NIR bandpass filters, according to his needs.
The MAIA M2single module can be composed using a pair of available band-pass filters. The choice of the pre-selected filter pairs will be made according to the most widely used multispectral indexes with two single bands, or on the basis of the aim of the multispectral survey. In the following table you can see the selected filters that are available in stock:
Each module has stand-alone capability with external trigger and strobe or free run mode, and presents several inputs/outputs for external devices interfacing such as trigger, strobe, serial port, USB and two aux port. The module/camera is based on a double global shutter CMOS sensor with 8/12 bits resolution and automatic exposure with selectable target value.
Single module of MAIA M2 has the lowest values in the market of modular multispectral cameras in terms of size (48 mm X 33 mm X 23 mm), weight (70 g) and price (1990 € until July 15th), but it presents the highest values in terms of resolution and sensitivity of sensors.
Multi-module management, up to 8 modules, is possible using the external MAIA M2 Control Unit that manages the images synchronization and geo-referencing, the powering of modules, the reading of PWM inputs, the light sensor input, two outputs with customizable variable advance for delay compensation of any connected DSLR cameras. An RTK version of MAIA M2 Control Unit is supplied including the GNSS antenna, the UHF antenna, the Lux Sensor and the connection cables for batteries, PWM inputs and DSLR shutter input. Multispectral raw images and parameters are stored in a removable SD card, and they can be downloaded from USB in order to be pre-processed with MultiCam Stitcher Pro, the MAIA images pre-processing software.
The following table shows some combinations of 2 or more MAIA M2 modules, useful to allow the calculation of many of the main multispectral indexes:
You can detect VIS-NIR informations through 9 global shutter sensors with high resolution and top sensitivity; next, you have the total control on creating your dataset of undistorted and geometrically corrected images for reflectance analysis, indexes calculation and photogrammetric processing. You can then make decisions on monitoring crops, wineyards, forests and coastal environments, in order to safeguard ecosystems and to make your agronomic system more efficient. Along with the camera, an image processing software will be provided for correction of geometric and radial distorsion, for coregistration (pixel-pixel convergence) of RAW multispectral images acquired with MAIA, with tools for indexes calculation and for band combinations.
Since its foundation, SAL Engineering has participated, contributing with the design and management of data acquisition, synchronization and processing systems, to several projects with agronomic and precision farming companies, or environmental protection agencies that deal with natural environments such as coastal dunes, forests, reclaimed sites, areas with high environmental risk.
SAL Engineering is a company specialized in photogrammetric surveys based in Italy: visit our website www.salengineering.it.
For any further information about services and products, send us an email at info@salengineering.it.
For any detailed information about products and technologies that deal with multispectral surveys, please contact us. SAL Engineering is providing accurate multispectral data to companies specialized in agronomic consulting thanks to our integrated systems based on platform, control system and sensors.
MAIA WV is the multispectral camera equipped with the same wavelenght intervals of the WorldView-2™ satellite owned by DigitalGlobe. Now, you can compare satellite data with high-resolution maps obtained through a multispectral survey conducted with MAIA WV mounted on your UAV, getting centimeters-level precision and accuracy. WorldView-2™ is a commercial earth observation satellite that provides eight-band multispectral imagery with 1.84 m resolution, in support of services such as agriculture, forest monitoring, land cover changes and natural disaster management. MAIA WV multispectral camera is based on an array of 9 sensors (1 RGB and 8 monochrome with relative band-pass filters) to detect multispectral imagery in the VIS-NIR spectrum from 390 nm to 950 nm: MAIA WV is the most advanced broadband multispectral camera for RPAS, aircrafts, terrestrial rovers available today, with bands in Coastal and Blue spectrum region.
MAIA S2is the multispectral camera equipped with the same wavelenght intervals of the European Spatial Agency‘s Sentinel-2™satellite. Sentinel-2™ is an earth observation mission developed by ESA as part of the Copernicus Programme to perform observations in support of services such as precision agriculture, forest monitoring, land cover changes detection, and natural disaster management. Now, you can compare free satellite data with high-resolution maps obtained through a multispectral survey conducted with MAIA S2, the multispectral camera with two narrow spectral bands both in Red Edge and in NIR region.
The key features of the new-born MAIA M2, that presents the same quality of sensors, filters and optics of the standard versions WV and S2, are basically linked to the modular system and to the freedom to customize the set of bandpass filters, with excellent cost/benefit ratio and perfect physical adaptability onboard data acquisition platforms.
Mapping of anthropogenic stress in vegetation and soil
Techniques of acquisition, processing and interpretation of multispectral data related to key environmental processes such as chlorophylline photosynthesis and plant nutrition, have been refined, especially in relation to the identification and mapping of anthropogenic stress caused by soil infiltration or dispersion of polluting material on the surface. Recent research suggests that there is a distinction recognizable by data acquired through multispectral relief, between natural stress due to, for example, drought and an induced or anthropogenic stress due to soil contamination: this difference is visible in a different physiological response of plants (Zinnert and others, 2012).
A series of computations between multispectral bands, known as vegetation indices, have been developed and applied in agronomy and environmental sciences to optimize information from multispectral data, which has an increasing geometric, spectral, radiometric and temporal resolution since new acquisition technologies such as RPAS and new sensors have seen significant technological development over the last decades (Thenkabail, 2000).
For environmental and agronomic applications, the bands most involved in the calculations are Red (630 nm to 690 nm), Red Edge (705 nm to 745 nm), NIR (750 nm to 950 nm), Green (525 nm to 575 nm) and Violet (390 nm to 450 nm). The main vegetation indices are the Normalized Differentiation Vegetation Index (NDVI) and its optimizations or transformations such as the Green Normalized Differentiation Vegetation Index (GNDVI), Soil Adjusted Vegetation Index (SAVI) and also in this case including its optimizations such as the TSAVI (Transformed Soil Adjusted Vegetation Index) or the Modified Soil Adjusted Vegetation Index (MSAVI). A very important index for evaluating water content and quality in vegetation and soil is NDWI (Normalized Difference Water Index). By applying the multispectral survey to environmental monitoring of soil matrix or vegetation matrix, these indices are useful for defining growth rates and the vegetative quality of leafy vegetation.
The study of one of these spectral bands, the Red Edge, allows specifically to classify vegetation contaminated by presence in the soil by inflow or gaseous hydrocarbon suspension.
To apply this method of analysis, it is necessary to first correctly classify the vegetation present on the soil and evaluate the moisture content, the species present, the vegetation cover, the leaf cover index, and the surface temperature in different lighting stages and in different seasons. Vegetation growing in soil contaminated by hydrocarbons has visible damages in the Red Edge band, which is the name given to the sudden change in the spectrum region ranging from 680 nm to 730 nm and is caused by a combined effect of a strong incident radiation absorption and strong inner reflection and scattering of the leaf called “leaf internal scattering”.
The shift in the Red Edge reflection of vegetation, which indicates a reduction in plant health or a stress condition linked to anthropogenic contamination, has long been studied and applied to the agronomic and environmental study of cultivated or vegetated areas.
Important tests in this field were carried out by our R&D team on a soil with heavy hydrocarbon contamination: applied remote sensing outputs that were compared in GIS environments were the multi-spectral orthophoto of the 8 bands of MAIA WV, one thermal orthophoto obtained with high resolution thermal camera and an RGB orthophoto always obtained with MAIA’s RGB sensor. With regard to site investigations in collaboration with environmental engineers to which these products serve as mapping basis for macro-assessment of contamination problems, it was possible to identify and map vegetal anomalies related to the presence of hydrocarbons in the soil, also found in a variation in surface temperature, as well as in a different reflection in the NIR band and, as previously mentioned, particularly in the Red Edge band, and in some indexes.
Figure 1: Detail of the Red Edge band image of a terrain with hydrocarbon contamination.Figure 2: Detail of a thermal orthophoto of a terrain that is contaminated by hydrocarbons.Figure 3: Detail of a RGB Orthophoto of a terrain that is contaminated by hydrocarbons.
The field activity is supported by valid scientific publications (Noomen, 2003 & 2008), in which the high-quality method is certified and in which there is evidence of high susceptibility of crops in the presence of gaseous hydrocarbons deposited on the ground or surface stagnation, and more specifically in the presence of Ethane gas (C2H6): cultures exposed to this gas are more spectrally reflected in bandwidths ranging from 570 nm to 700 nm (Noomen 2008).
Thanks to the multispectral survey made with MAIA WV, it is also possible to detect an accentuated concentration of metals in the soil matrix. Wu et al. (2007) demonstrated that spectroscopy in visible and near infrared regions has a strong negative correlation with certain metals (Cadmium, Chrome, Copper, Mercury, Lead, Zinc) in contaminated soils, depending on the presence iron oxide and carbon content. Chloe et al. (2008) and Wu et al. (2008) continued fruitful research on the use of multispectral remote sensing to diagnose the presence of high concentrations of certain metals in contaminated soils.
Other scientific studies (Asmaryan et al 2014) confirm the positive correlations between the presence of chromium, lead and zinc measured in the site and detected by multispectral survey, on non-vegetated soil (whose NDVI index by definition goes from 0 to 0.3). The same studies have identified specific reflectance values at certain wavelengths of certain metals in the soil matrix, as shown in the table.
Figure 4: Correlation in different spectral ranges between metal content in non-plant soil and spectral values derived from a WorldView-2 satellite image.
Concerning the multispectral knowledge of the ground matrix, MAIA WV images, related to the wavelength ranges of satellites investigating the spectrum from visible to infrared such as Landsat TM, World-View 2 and Sentinel-2, can be processed to locate and map a large set of minerals, including iron oxides, clays, and other hydroxyl minerals that are often in nature at hydrothermal alterations in the outcrops (Source: Andrea G. Fabbri, Gabor Gaál, Richard B. McCammon, Deployment and Geoenvironmental Models for Resource Exploitation and Environmental Security, Springer Science & Business Media, 2012).
Geometric calibration and radiometric correction of the MAIA Multispectral Camera
As a result of the Conference “Frontiers in Spectral imaging and 3D Technologies for Geospatial Solutions” that took place in Jyväskylä, Finland, on 25-27 October 2017, a paper has been discussed, published and scientifically reviewed. The title of the article is “Geometric calibration and radiometric correction of the MAIA Multispectral Camera” and it is published on “The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, Volume XLII-3/W3, 2017”. This article has been peer-reviewed.
Multispectral imaging is a widely used remote sensing technique, whose applications range from agriculture to environmental monitoring, from food quality check to cultural heritage diagnostic. A variety of multispectral imaging sensors are available on the market, many of them designed to be mounted on different platform, especially small drones. This work focuses on the geometric and radiometric characterization of a brand-new, lightweight, low-cost multispectral camera called MAIA. The MAIA camera is equipped with nine sensors, allowing for the acquisition of images in the visible and near infrared parts of the electromagnetic spectrum.
You can read and download the paper by clicking on the link below.
“Multispectral cameras are more and more useful instruments in Precision Agriculture. Their flexibility in use increases with the number of bands available. For example, MAIA (one of the most interesting instruments on the market, realized by SAL Engineering) with 9 monochromatic sensors in 9 different bands permits to calculate over 20 vegetational indices among the most common. Those indices are efficient in Precision Agriculture to define agronomical interventions in different vegetative moments of the colture, thanks to the support given by the prescription maps, in the planning of time and distribution of the harvest, in recognizing health deseases or points of maturation, and in general to evaluate the vegetative health status of the colture”.
You can read and download the full article by clicking the link below.